arboreto
Infer gene regulatory networks (GRNs) from gene expression data using scalable algorithms (GRNBoost2, GENIE3).
Skill by Vaishnav14220
Install
Works with Claude Code, Claude apps, Codex, Cursor, Gemini CLI, GitHub Copilot, VS Code, OpenCode, Goose, Windsurf. Read the repository before you give any tool access to your data.
npx agentmarket install skill/vaishnav14220-arboreto
Asks which of your tools to add it to (Claude Code, Codex, Cursor, VS Code, Windsurf, Gemini CLI, Claude Desktop) and shows the change first. See https://agentmart.dev/cli.
Get the weekly diff
The weekly diff: one email a week with new agent tools, notable updates and grade changes, plus security alerts for tools you follow. Double opt-in, one-click unsubscribe.
About
Use cases: data
Reviews
Write a reviewNo reviews yet. Installed it? Reviews come from verified installers only. How reviews work
Permissions: not checked yet.
What's inside
- Skill name
arboreto- Description
- Infer gene regulatory networks (GRNs) from gene expression data using scalable algorithms (GRNBoost2, GENIE3). Use when analyzing transcriptomics data (bulk RNA-seq, single-cell RNA-seq) to identify transcription factor-target gene relationships and regulatory interactions. Supports distributed computation for large-scale datasets.
- License
- BSD-3-Clause license
- Metadata
- skill-author: K-Dense Inc.
- Instructions
- 235 lines in SKILL.md · view on GitHub
Before installing
- Ships executable scripts
Files (5)
- SKILL.md
- algorithms.md · references/
- basic_inference.md · references/
- distributed_computing.md · references/
- basic_grn_inference.py · scripts/
The license isn't open source, so the instructions aren't shown here. Read SKILL.md on GitHub
More from Vaishnav14220/studium_teach
- 0.402score
algorithmic-art
Vaishnav14220
Creating algorithmic art using p5.js with seeded randomness and interactive parameter exploration.
SkillDFreshness: D★ 1Claude Code +9 - 0.402score
brand-guidelines
Vaishnav14220
Applies Anthropic's official brand colors and typography to any sort of artifact that may benefit from having Anthropic's look-and-feel.
SkillDFreshness: D★ 1Claude Code +9 - 0.402score
canvas-design
Vaishnav14220
Create beautiful visual art in .png and .pdf documents using design philosophy.
SkillDFreshness: D★ 1Claude Code +9
Signals
- Stars
- 1
- Forks
- 0
- Open issues
- 0
- Last commit (this folder)
- Apr 18, 2026 (6 months ago)
From GitHub (fetched Oct 24, 2026).
Details
- License
- BSD-3-Clause license
- Repository
- github.com/Vaishnav14220/studium_teach
- First seen
- Oct 24, 2026
- Last checked
- Oct 24, 2026
- Source
- GitHubgithub-graphql
Same skill elsewhere
Copies of this SKILL.md published by others; search shows only one of them.
- 0.489score
arboreto
FreedomIntelligence
Infer gene regulatory networks (GRNs) from gene expression data using scalable algorithms (GRNBoost2, GENIE3).
SkillDFreshness: D★ 3.1KClaude Code +9 - 0.355score
arboreto
ccfwwm
Infer gene regulatory networks (GRNs) from gene expression data using scalable algorithms (GRNBoost2, GENIE3).
SkillAFreshness: A★ 1Claude Code +9 - 0.334score
arboreto
LUNARTECH-X
Infer gene regulatory networks (GRNs) from gene expression data using scalable algorithms (GRNBoost2, GENIE3).
SkillCFreshness: C★ 17Claude Code +9 - 0.327score
arboreto
tassiovale
Infer gene regulatory networks (GRNs) from gene expression data using scalable algorithms (GRNBoost2, GENIE3).
SkillCFreshness: C★ 12Claude Code +9 - 0.320score
arboreto
shushuzn
Infer gene regulatory networks (GRNs) from gene expression data using scalable algorithms (GRNBoost2, GENIE3).
SkillCFreshness: C★ 5Claude Code +9 - 0.315score
arboreto
nikhilesh-s
Infer gene regulatory networks (GRNs) from gene expression data using scalable algorithms (GRNBoost2, GENIE3).
SkillBFreshness: BClaude Code +9 - 0.313score
arboreto
qinyan-ai
Infer gene regulatory networks (GRNs) from gene expression data using scalable algorithms (GRNBoost2, GENIE3).
SkillDFreshness: D★ 87Claude Code +9 - 0.306score
arboreto
ovachiever
Infer gene regulatory networks (GRNs) from gene expression data using scalable algorithms (GRNBoost2, GENIE3).
SkillDFreshness: D★ 55Claude Code +9 - 0.302score
arboreto
Zaoqu-Liu
Infer gene regulatory networks (GRNs) from gene expression data using scalable algorithms (GRNBoost2, GENIE3).
SkillDFreshness: D★ 60Claude Code +9 - 0.285score
arboreto
PROgram52bc
Infer gene regulatory networks (GRNs) from gene expression data using scalable algorithms (GRNBoost2, GENIE3).
SkillCFreshness: CClaude Code +9 - 0.269score
arboreto
lamm-mit
Infer gene regulatory networks (GRNs) from gene expression data using scalable algorithms (GRNBoost2, GENIE3).
SkillCFreshness: C★ 250Claude Code +9 - 0.269score
arboreto
mugpeng
Infer gene regulatory networks (GRNs) from gene expression data using scalable algorithms (GRNBoost2, GENIE3).
SkillDFreshness: D★ 2Claude Code +9
More from Vaishnav14220
- 0.402score
algorithmic-art
Vaishnav14220
Creating algorithmic art using p5.js with seeded randomness and interactive parameter exploration.
SkillDFreshness: D★ 1Claude Code +9 - 0.402score
brand-guidelines
Vaishnav14220
Applies Anthropic's official brand colors and typography to any sort of artifact that may benefit from having Anthropic's look-and-feel.
SkillDFreshness: D★ 1Claude Code +9 - 0.402score
canvas-design
Vaishnav14220
Create beautiful visual art in .png and .pdf documents using design philosophy.
SkillDFreshness: D★ 1Claude Code +9
Cite this page
arboreto skill. Agent Mart. https://agentmart.dev/skills/vaishnav14220-arboreto (last updated 2026-10-24)