cross-branch-integration
Integrate results across omics or analysis branches by validating sample correspondence, harmonizing identifiers and scales, computing gene intersections, and…
Skill by Sheldon-Bacchus
Chalk Labs
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Install
Works with Claude Code, Claude apps, Codex, Cursor, Gemini CLI, GitHub Copilot, VS Code, OpenCode, Goose, Windsurf. Read the repository before you give any tool access to your data.
npx agentmarket install skill/sheldon-bacchus-cross-branch-integration-a4ae12
Asks which of your tools to add it to (Claude Code, Codex, Cursor, VS Code, Windsurf, Gemini CLI, Claude Desktop) and shows the change first. See https://agentmart.dev/cli.
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What's inside
- Skill name
cross-branch-integration- Description
- Integrate results across omics or analysis branches by validating sample correspondence, harmonizing identifiers and scales, computing gene intersections, and stratifying concordant versus discordant directions. Use when branches share subjects or biological questions and their outputs must be compared or combined. Do not use as a substitute for per-omic normalization or a causal claim.
- License
- unknown
- Metadata
- role: workflow-control-and-result-interpretation · source: vendor/sources/bioSkills/multi-omics-integration · primary_tool: Rscript
- Instructions
- 46 lines in SKILL.md · view on GitHub
Files (6)
- SKILL.md
- harmonization-usage.md · references/
- integration-usage.md · references/
- integration_design_diagnostic.R · references/
- upstream-data-harmonization.md · references/
- upstream-integration-design.md · references/
The license isn't open source, so the instructions aren't shown here. Read SKILL.md on GitHub
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cross-branch-integration
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Signals
- Stars
- 0
- Forks
- 0
- Open issues
- 0
- Last commit (this folder)
- Sep 3, 2026 (1 month ago)
From GitHub (fetched Oct 24, 2026).
Details
- License
- License unknown
- Repository
- github.com/Sheldon-Bacchus/bio-spec-mvp
- First seen
- Oct 24, 2026
- Last checked
- Oct 24, 2026
- Source
- GitHubgithub-graphql
Same skill elsewhere
Copies of this SKILL.md published by others; search shows only one of them.
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Integrate results across omics or analysis branches by validating sample correspondence, harmonizing identifiers and scales, computing gene intersections, and…
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cross-branch-integration skill. Agent Mart. https://agentmart.dev/skills/sheldon-bacchus-cross-branch-integration-a4ae12 (last updated 2026-10-24)