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multiqc

Aggregate bounded bioinformatics QC outputs with the project MultiQC wrapper, producing a real HTML report and machine-readable data that are checked against…

Skill by Sheldon-Bacchus

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Works with Claude Code, Claude apps, Codex, Cursor, Gemini CLI, GitHub Copilot, VS Code, OpenCode, Goose, Windsurf. Read the repository before you give any tool access to your data.

npx agentmarket install skill/sheldon-bacchus-multiqc

Asks which of your tools to add it to (Claude Code, Codex, Cursor, VS Code, Windsurf, Gemini CLI, Claude Desktop) and shows the change first. See https://agentmart.dev/cli.

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About

Aggregate bounded bioinformatics QC outputs with the project MultiQC wrapper, producing a real HTML report and machine-readable data that are checked against the input fixture. Use when a Spec feature requires a user-openable QC report or a QC evidence artifact. Do not treat MultiQC itself as a pass/fail gate or fabricate a report/verdict.

Use cases: documents, frontend, data

Reviews

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Permissions

What this skill can do and what it asks for, from its SKILL.md. Checked Oct 25, 2026.

Tools
No tools found
Secrets
None asked for
Install scripts
None found

Network hosts it talks to 1

  • codeload.github.com · found in install command

Files it touches

  • ~/.claude/skills/multiqc

What's inside

Skill name
multiqc
Description
Aggregate bounded bioinformatics QC outputs with the project MultiQC wrapper, producing a real HTML report and machine-readable data that are checked against the input fixture. Use when a Spec feature requires a user-openable QC report or a QC evidence artifact. Do not treat MultiQC itself as a pass/fail gate or fabricate a report/verdict.
License
unknown
Metadata
role: tool-usage-and-workflow-control · source: vendor/sources/bioSkills/reporting/automated-qc-reports and vendor/sources/MultiQC · primary_tool: multiqc
Instructions
53 lines in SKILL.md · view on GitHub

Files (4)

  • SKILL.md
  • multiqc-usage.md · references/
  • upstream-automated-qc-reports.md · references/
  • upstream-multiqc-module-skill.md · references/

The license isn't open source, so the instructions aren't shown here. Read SKILL.md on GitHub

More from Sheldon-Bacchus/bio-spec-mvp

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Last commit (this folder)
Sep 3, 2026 (1 month ago)

From GitHub (fetched Oct 24, 2026).

Details

License
License unknown
Repository
github.com/Sheldon-Bacchus/bio-spec-mvp
First seen
Oct 24, 2026
Last checked
Oct 24, 2026
Source
GitHubgithub-graphql

Same skill elsewhere

Copies of this SKILL.md published by others; search shows only one of them.

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Cite this page

multiqc skill. Agent Mart. https://agentmart.dev/skills/sheldon-bacchus-multiqc (last updated 2026-10-24)