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cross-branch-integration

Integrate results across omics or analysis branches by validating sample correspondence, harmonizing identifiers and scales, computing gene intersections, and…

Skill by Sheldon-Bacchus

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Install

Works with Claude Code, Claude apps, Codex, Cursor, Gemini CLI, GitHub Copilot, VS Code, OpenCode, Goose, Windsurf. Read the repository before you give any tool access to your data.

npx agentmarket install skill/sheldon-bacchus-cross-branch-integration

Asks which of your tools to add it to (Claude Code, Codex, Cursor, VS Code, Windsurf, Gemini CLI, Claude Desktop) and shows the change first. See https://agentmart.dev/cli.

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About

Integrate results across omics or analysis branches by validating sample correspondence, harmonizing identifiers and scales, computing gene intersections, and stratifying concordant versus discordant directions. Use when branches share subjects or biological questions and their outputs must be compared or combined. Do not use as a substitute for per-omic normalization or a causal claim.

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Permissions

What this skill can do and what it asks for, from its SKILL.md. Checked Oct 25, 2026.

Tools
No tools found
Secrets
None asked for
Install scripts
None found

Network hosts it talks to 1

  • codeload.github.com · found in install command

Files it touches

  • ~/.claude/skills/cross-branch-integration

What's inside

Skill name
cross-branch-integration
Description
Integrate results across omics or analysis branches by validating sample correspondence, harmonizing identifiers and scales, computing gene intersections, and stratifying concordant versus discordant directions. Use when branches share subjects or biological questions and their outputs must be compared or combined. Do not use as a substitute for per-omic normalization or a causal claim.
License
unknown
Metadata
role: workflow-control-and-result-interpretation · source: vendor/sources/bioSkills/multi-omics-integration · primary_tool: Rscript
Instructions
46 lines in SKILL.md · view on GitHub

Files (6)

  • SKILL.md
  • harmonization-usage.md · references/
  • integration-usage.md · references/
  • integration_design_diagnostic.R · references/
  • upstream-data-harmonization.md · references/
  • upstream-integration-design.md · references/

The license isn't open source, so the instructions aren't shown here. Read SKILL.md on GitHub

More from Sheldon-Bacchus/bio-spec-mvp

Signals

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Last commit (this folder)
Sep 2, 2026 (1 month ago)

From GitHub (fetched Oct 24, 2026).

Details

License
License unknown
Repository
github.com/Sheldon-Bacchus/bio-spec-mvp
First seen
Oct 24, 2026
Last checked
Oct 24, 2026
Source
GitHubgithub-graphql

Same skill elsewhere

Copies of this SKILL.md published by others; search shows only one of them.

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Cite this page

cross-branch-integration skill. Agent Mart. https://agentmart.dev/skills/sheldon-bacchus-cross-branch-integration (last updated 2026-10-24)