guided-workflows
Create reviewable, researcher-approved plans from Molemo scientific tools.
Skill by phenixace
Install
Works with Claude Code, Claude apps, Codex, Cursor, Gemini CLI, GitHub Copilot, VS Code, OpenCode, Goose, Windsurf. Read the repository before you give any tool access to your data.
npx agentmarket install skill/phenixace-guided-workflows
Asks which of your tools to add it to (Claude Code, Codex, Cursor, VS Code, Windsurf, Gemini CLI, Claude Desktop) and shows the change first. See https://agentmart.dev/cli.
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About
Use cases: data, research
Reviews
Write a reviewNo reviews yet. Installed it? Reviews come from verified installers only. How reviews work
Permissions
What this skill can do and what it asks for, from its SKILL.md. Checked Oct 25, 2026.
- Tools
- No tools found
- Secrets
- None asked for
- Install scripts
- None found
- Runs as
- Python package
Network hosts it talks to 1
codeload.github.com· found in install command
Files it touches
~/.claude/skills/guided-workflows
What's inside
- Skill name
guided-workflows- Description
- Create reviewable, researcher-approved plans from Molemo scientific tools. Use when a user asks for a plan, pipeline, guided analysis, or multi-step run that should not execute before explicit approval.
- License
- MIT
- Instructions
- 7 lines in SKILL.md · view on GitHub
Before installing
- Ships executable scripts
Files (4)
- SKILL.md
- openai.yaml · agents/
- handler.py · scripts/
- skill.json
SKILL.md (first lines)
# Guided Workflows Use `workflow_list_templates` to find a supported workflow, then use `workflow_create_plan` with concrete inputs. State that the plan is pending researcher approval. The Agent may create and inspect plans, but must never imply that a pending plan has run. Approval and execution are intentionally unavailable as skill tools and must happen through the local WorkBench approval control.
From phenixace/Molemo_WorkBench, MIT.
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Signals
- Stars
- 2
- Forks
- 0
- Open issues
- 0
- Last commit (this folder)
- Aug 29, 2026 (1 month ago)
From GitHub (fetched Oct 24, 2026).
Details
- License
- MIT
- Repository
- github.com/phenixace/Molemo_WorkBench
- First seen
- Oct 24, 2026
- Last checked
- Oct 24, 2026
- Source
- GitHubgithub-graphql
More from phenixace
- 0.557score
scientific-visualization
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Turn molecular and protein analysis results into declarative property charts and residue-level sequence tracks.
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chembl-bioactivity
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Review source-linked ChEMBL small-molecule activity evidence for an exact UniProt single-protein target.
SkillBFreshness: B★ 2Claude Code +9 - 0.557score
hmmer-profile-search
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Validate and run bounded local HMMER3 profile-to-protein searches with domain coordinates, explicit thresholds, researcher approval and auditable outputs.
SkillBFreshness: B★ 2Claude Code +9 - 0.557score
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Route broad life-science research questions to the smallest useful set of Molemo skills.
SkillBFreshness: B★ 2Claude Code +9 - 0.557score
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Retrieve experimental structures from RCSB PDB, predicted structures from AlphaFold DB, or parse PDB/mmCIF files in the local workspace.
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Run deterministic FASTQ quality control on a file inside the constrained local workspace.
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Cite this page
guided-workflows skill. Agent Mart. https://agentmart.dev/skills/phenixace-guided-workflows (last updated 2026-10-24)