anndata
Data structure for annotated matrices in single-cell analysis.
Skill by Masterofowls
Install
Works with Claude Code, Claude apps, Codex, Cursor, Gemini CLI, GitHub Copilot, VS Code, OpenCode, Goose, Windsurf. Read the repository before you give any tool access to your data.
npx agentmarket install skill/masterofowls-anndata
Asks which of your tools to add it to (Claude Code, Codex, Cursor, VS Code, Windsurf, Gemini CLI, Claude Desktop) and shows the change first. See https://agentmart.dev/cli.
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About
Use cases: data
Reviews
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What's inside
- Skill name
anndata- Description
- Data structure for annotated matrices in single-cell analysis. Use when working with .h5ad files or integrating with the scverse ecosystem. This is the data format skill—for analysis workflows use scanpy; for probabilistic models use scvi-tools; for population-scale queries use cellxgene-census.
- License
- BSD-3-Clause license
- Compatibility
- Requires Python 3.11+ and uv. Examples target AnnData 0.12.16, with experimental APIs clearly marked where used.
- Allowed tools
- Read, Write, Edit, Bash
- Metadata
- version: 1.1 · skill-author: K-Dense Inc.
- Instructions
- 422 lines in SKILL.md · view on GitHub
Before installing
- Pre-approves any shell command
Files (6)
- SKILL.md
- best_practices.md · references/
- concatenation.md · references/
- data_structure.md · references/
- io_operations.md · references/
- manipulation.md · references/
The license isn't open source, so the instructions aren't shown here. Read SKILL.md on GitHub
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Signals
- Stars
- 0
- Forks
- 0
- Open issues
- 0
- Last commit (this folder)
- Aug 4, 2026 (2 months ago)
From GitHub (fetched Oct 24, 2026).
Details
- Version
- 1.1
- License
- BSD-3-Clause license
- Repository
- github.com/Masterofowls/skills
- First seen
- Oct 24, 2026
- Last checked
- Oct 24, 2026
- Source
- GitHubgithub-graphql
Same skill elsewhere
Copies of this SKILL.md published by others; search shows only one of them.
- 0.597score
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Data structure for annotated matrices in single-cell analysis.
SkillAFreshness: A★ 325Claude Code +9 - 0.355score
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Data structure for annotated matrices in single-cell analysis.
SkillAFreshness: A★ 1Claude Code +9 - 0.334score
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SkillCFreshness: C★ 17Claude Code +9 - 0.327score
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SkillCFreshness: C★ 12Claude Code +9 - 0.320score
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shushuzn
Data structure for annotated matrices in single-cell analysis.
SkillCFreshness: C★ 5Claude Code +9 - 0.315score
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nikhilesh-s
Data structure for annotated matrices in single-cell analysis.
SkillBFreshness: BClaude Code +9 - 0.313score
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SkillDFreshness: D★ 87Claude Code +9 - 0.302score
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SkillDFreshness: D★ 60Claude Code +9 - 0.285score
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SkillDFreshness: D★ 2Claude Code +9 - 0.259score
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Cite this page
anndata skill. Agent Mart. https://agentmart.dev/skills/masterofowls-anndata (last updated 2026-10-24)