bio-hi-c-analysis-hic-visualization
Visualize Hi-C contact matrices, TADs, loops, and genomic features using matplotlib, cooltools, and HiCExplorer.
Skill by FreedomIntelligence
Install
Works with Claude Code, Claude apps, Codex, Cursor, Gemini CLI, GitHub Copilot, VS Code, OpenCode, Goose, Windsurf. Read the repository before you give any tool access to your data.
npx agentmarket install skill/freedomintelligence-bio-hi-c-analysis-hic-visualization
Asks which of your tools to add it to (Claude Code, Codex, Cursor, VS Code, Windsurf, Gemini CLI, Claude Desktop) and shows the change first. See https://agentmart.dev/cli.
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About
Use cases: data
Reviews
Write a reviewNo reviews yet. Installed it? Reviews come from verified installers only. How reviews work
Permissions
What this skill can do and what it asks for, from its SKILL.md. Checked Oct 25, 2026.
- Tools
- No tools found
- Secrets
- None asked for
- Install scripts
- None found
- Runs as
- Python package
Network hosts it talks to 1
codeload.github.com· found in install command
Files it touches
~/.claude/skills/bio-hi-c-analysis-hic-visualization
What's inside
- Skill name
bio-hi-c-analysis-hic-visualization- Description
- Visualize Hi-C contact matrices, TADs, loops, and genomic features using matplotlib, cooltools, and HiCExplorer. Create triangle plots, virtual 4C, and multi-track figures. Use when visualizing contact matrices or genomic features.
- License
- unknown
- Instructions
- 292 lines in SKILL.md · view on GitHub
Before installing
- Ships executable scripts
- Instructions call the network
Files (3)
- SKILL.md
- plot_hic.py · examples/
- usage-guide.md
The license isn't open source, so the instructions aren't shown here. Read SKILL.md on GitHub
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Signals
- Stars
- 3,080
- Forks
- 419
- Open issues
- 9
- Last commit (this folder)
- Mar 8, 2026 (7 months ago)
From GitHub (fetched Oct 24, 2026).
Details
- License
- License unknown
- First seen
- Oct 24, 2026
- Last checked
- Oct 24, 2026
- Source
- GitHubgithub-graphql
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Cite this page
bio-hi-c-analysis-hic-visualization skill. Agent Mart. https://agentmart.dev/skills/freedomintelligence-bio-hi-c-analysis-hic-visualization (last updated 2026-10-24)