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hm-l3-deep-research

Conduct version-matched deep research with MCP tools and citation tracking.

Skill by shynlee04

IndexedMIT★ 51
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Works with Claude Code, Claude apps, Codex, Cursor, Gemini CLI, GitHub Copilot, VS Code, OpenCode, Goose, Windsurf. Read the repository before you give any tool access to your data.

npx agentmarket install skill/shynlee04-hm-l3-deep-research

Asks which of your tools to add it to (Claude Code, Codex, Cursor, VS Code, Windsurf, Gemini CLI, Claude Desktop) and shows the change first. See https://agentmart.dev/cli.

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About

Conduct version-matched deep research with MCP tools and citation tracking. Use when investigating libraries, verifying API signatures, or gathering multi-source evidence. Stage 2 of the hm-research-chain pipeline. Consumes codebase maps from hm-detective and cached assets from hm-tech-stack-ingest. Feeds findings into hm-synthesis for artifact compression. NOT for quick lookups or single-source checks.

Use cases: backend, data, research, agent-building

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Permissions

What this skill can do and what it asks for, from its SKILL.md. Checked Oct 25, 2026.

Tools
No tools found
Secrets
None asked for
Install scripts
None found
Runs as
Shell scripts

Network hosts it talks to 1

  • codeload.github.com · found in install command

Files it touches

  • ~/.claude/skills/hm-l3-deep-research

Tools it pre-approves 6

From allowed-tools in SKILL.md: the agent may use these without asking you each time.

  • Read
  • Write
  • Edit
  • Bash
  • Glob
  • Grep

What's inside

Skill name
hm-l3-deep-research
Description
Conduct version-matched deep research with MCP tools and citation tracking. Use when investigating libraries, verifying API signatures, or gathering multi-source evidence. Stage 2 of the hm-research-chain pipeline. Consumes codebase maps from hm-detective and cached assets from hm-tech-stack-ingest. Feeds findings into hm-synthesis for artifact compression. NOT for quick lookups or single-source checks.
License
MIT
Allowed tools
Read, Write, Edit, Bash, Glob, Grep
Metadata
role: research · layer: 2 · pattern: P1
Instructions
538 lines in SKILL.md · view on GitHub

Before installing

  • Ships executable scripts
  • Pre-approves any shell command

Agent Skills spec issues

  • body: 538 lines (spec recommends under 500)

Files (18)

  • SKILL.md
  • .gitkeep · evals/
  • evals.json · evals/
  • .gitkeep · metrics/
  • rich-gate-scorecard.md · metrics/
  • brainstorming-shaping.md · references/
  • case-comparison.md · references/
  • edge-cases.md · references/
  • interface-tradeoffs.md · references/
  • requirements-vs-spec.md · references/
  • research-patterns.md · references/
  • .gitkeep · scripts/
  • validate-rich-package.sh · scripts/
  • .gitkeep · templates/
  • contradiction-matrix.md · templates/
  • source-evaluation.md · templates/
  • .gitkeep · workflows/
  • sequential-research-gates.md · workflows/

SKILL.md (first lines)

## Overview

Conduct version-matched deep research with MCP tools and citation tracking. Use when investigating libraries, verifying API signatures, gathering multi-source evidence, or producing comprehensive research reports. Returns structured findings with citations and evidence persistence.

## Quick Jump

| Research Need | Start Here |
|---------------|------------|
| "This case vs. that case" | [Case Comparison](references/case-comparison.md) |
| "Something went wrong" | [Edge Cases](references/edge-cases.md) |
| "When do I stop researching?" | [Requirements vs. Spec](references/requirements-vs-spec.md) |
| "Where do I draw the line?" | [Interface Tradeoffs](references/interface-tradeoffs.md) |
| "Turn findings into features" | [Brainstorming & Shaping](references/brainstorming-shaping.md) |
| "What kind of research am I doing?" | [Research Patterns](references/research-patterns.md) |
| "This is high-stakes or exhaustive" | [Sequential Research Gates](workflows/sequential-research-gates.md) |
| "Which sources should I trust?" | [Source Evaluation Template](templates/source-evaluation.md) |
| "Sources disagree" | [Contradiction Matrix](templates/contradiction-matrix.md) |

<execution_context>
For reading modes during investigation: load skill "hm-detective"
Reading modes: SKIM for orientation, SCAN for targeted extraction, DEEP for interface analysis

For cached tech stack assets (offline API signatures, repo references): load skill "hm-tech-stack-ingest"
Cross-architecture research routing: When hm-tech-stack-ingest has cached a library, use the cached
API signatures instead of Context7 or web searches. This validates against REAL code, not assumptions.

For artifact export and compression: load skill "hm-synthesis"
Export tier: Standard (findings + decisions) for most research
Compression: Snapshot for full analysis, Focused for targeted investigation

For chain orchestration: load skill "hm-research-chain"
hm-deep-research is Stage 2 of the canonical research chain.
</execution_context>

## Cross-Architecture Research Routing

When `hm-tech-stack-ingest` has cached a library's full source, API signatures, or documentation, route research requests through cached assets BEFORE external MCP tools.

### Routing Decision Tree

```
Is the target library cached in references/tech-stacks/<name>/?
├── YES → Use cached assets first
│   ├── Need API signature? → grep references/tech-stacks/<name>/api/
│   ├── Need full source? → read references/tech-stacks/<name>/raw/
│   ├── Need usage examples? → read references/tech-stacks/<name>/examples/
│   └── Cached version differs from installed? → Flag discrepancy, use installed version
└── NO → Use MCP tools (Context7, DeepWiki, Repomix, Tavily)
    └── After research, consider ingesting via hm-tech-stack-ingest for future use
```

### Validation Priority

When both cached assets and web documentation are available:

| Source | Priority | When to Trust |
|--------|----------|---------------|
| **Cached source code** (repomix raw/) | HIGHEST | For API signatures, type definitions, and implementation details |
| **Cached API docs** (context7 api/) | HIGH | For official API behavior and examples |
| **Cached structured docs** (deepwiki docs/) | MEDIUM | For architecture overview and module relationships |
| **Web search** (Tavily, Brave) | LOW | Only for current information, news, or community patterns |
| **Live Context7** | FALLBACK | When nothing is cached |

**Rule:** If cached source code exists for the exact version in use, validate every claimed API signature against the cached source. Do not trust web documentation without verification against cached code.

---

## The Six Concepts

Every research task touches at least two of these. Complex tasks touch all six.

### 1. Case Comparison — "This Case vs. That Case"

Research is comparative by nature. You are always deciding between approaches, tools, patterns, or solutions. The case comparison framework gives you a structure for side-by-side analysis.

**When to use it**: Every time you evaluate two or more options.

| Dimension | Case A | Case B |
|-----------|--------|--------|
| Approach | [what A does] | [what B does] |
| Depth needed | [shallow/medium/deep] | [shallow/medium/deep] |
| Risk of wrong answer | [low/medium/high] | [low/medium/high] |
| Time to validate | [hours/days] | [hours/days] |
| Reversibility | [easy/hard] | [easy/hard] |

**Example**: "Should we use Prisma or Drizzle for our ORM?"

| | Prisma | Drizzle |
|---|--------|---------|
| Approach | Schema-first, generated client | SQL-like, type-inferred |
| Depth needed | Medium (docs are thorough) | Deep (patterns are emergent) |
| Risk of wrong answer | Medium (lock-in) | Low (closer to SQL) |
| Time to validate | 2 days (migration tooling) | 1 day (simpler setup) |
| Reversibility | Hard (schema migration) | Easy (raw SQL fallback) |

Load [references/case-comparison.md](references/case-comparison.md) for 5 complete case pairs with decision frameworks.

---

### 2. Edge Cases — When Research Goes Wrong

Research fails in predictable ways. The top 6 failure modes:

| Failure | Signal | First Response |
|---------|--------|----------------|
| Contradictory sources | Two authoritative sources disagree | Check dates. Newer wins, but verify changelogs. |
| Outdated information | Last update > 12 months, API version mismatch | Search with freshness filter. Check GitHub releases. |
| Too new for patterns | < 6 months old, < 100 GitHub stars | Read source code directly. Build a prototype. |
| Vendor docs are wrong | Code doesn't match documented behavior | Create a minimal repro. File an issue. Use the code, not the docs. |
| No clear winner | 3+ valid approaches, zero differentiation | Define your constraints first. Pick the simplest that fits. |
| Scope creep | Research question keeps expanding | Write a one-sentence scope. Anything outside = separate investigation. |

Load [references/edge-cases.md](references/edge-cases.md) for each failure's full resolution workflow.

---

### 3. Requirements vs. Spec — When to Stop Researching

Research has a natural endpoint. Cross it and you are writing a specification, not doing research. The boundary looks like this:

From shynlee04/hivemind-plugin, MIT.

More from shynlee04/hivemind-plugin

Signals

Stars
51
Forks
16
Open issues
21
Last commit (this folder)
May 7, 2026 (5 months ago)

From GitHub (fetched Oct 24, 2026).

Details

License
MIT
First seen
Oct 24, 2026
Last checked
Oct 24, 2026

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hm-l3-deep-research skill. Agent Mart. https://agentmart.dev/skills/shynlee04-hm-l3-deep-research (last updated 2026-10-24)