fair-esm2

Use ESM2 protein language models for embeddings, mutation scoring, remote homology, or representation analysis.

IndexedMIT

Install

Works with Claude Code, Claude apps, Codex, Cursor, Gemini CLI, GitHub Copilot, VS Code, OpenCode, Goose, Windsurf. Read the repository before you give any tool access to your data.

npx agentmarket install skill/paramjani21-fair-esm2

Asks which of your tools to add it to (Claude Code, Codex, Cursor, VS Code, Windsurf, Gemini CLI, Claude Desktop) and shows the change first. See https://agentmart.dev/cli.

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About

Use ESM2 protein language models for embeddings, mutation scoring, remote homology, or representation analysis. Use when a task needs protein embeddings, zero-shot variant scores, clustering, or sequence-function triage.

Use cases: productivity

Reviews

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Permissions

What this skill can do and what it asks for, from its SKILL.md. Checked Oct 25, 2026.

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Network hosts it talks to 1

codeload.github.com · found in install command

Files it touches

~/.claude/skills/fair-esm2

What's inside

Skill name: fair-esm2
Description: Use ESM2 protein language models for embeddings, mutation scoring, remote homology, or representation analysis. Use when a task needs protein embeddings, zero-shot variant scores, clustering, or sequence-function triage.
License: MIT
Instructions: 15 lines in SKILL.md · view on GitHub

Files (1)

SKILL.md

SKILL.md (first lines)

# Fair ESM2

Use this skill for ESM2-style protein language model analysis.

Workflow:

1. Normalize proteins into FASTA with stable identifiers and mutation notation.
2. Verify the local package, checkpoint, endpoint, or notebook route before execution.
3. Save embeddings, variant-score tables, clustering plots, model version, command, and runtime logs.
4. Compare model-derived rankings against UniProt, structures, conservation, assays, or literature.
5. Mark sequence regions with poor coverage, disorder, low homology, or domain-boundary ambiguity.

Use ESM2 outputs as features or hypotheses unless a source-backed validation step supports the conclusion.

From ParamJani21/feynman, MIT.

Signals

Stars: 0
Forks: 0
Open issues: 0
Last commit (this folder): Jul 5, 2026 (3 months ago)

From GitHub (fetched Oct 24, 2026).

Details

License: MIT
Repository: github.com/ParamJani21/feynman
First seen: Oct 24, 2026
Last checked: Oct 24, 2026
Source: GitHub github-graphql

More from ParamJani21

Cite this page

fair-esm2 skill. Agent Mart. https://agentmart.dev/skills/paramjani21-fair-esm2 (last updated 2026-10-24)