bio-atac-seq-allele-specific-accessibility
Detect allele-specific chromatin accessibility from ATAC-seq using WASP, GATK ASEReadCounter, or RASQUAL.
Skill by FridrichMethod
Chalk Labs
Need help deploying bio-atac-seq-allele-specific-accessibility?
Chalk Labs sets up agents like this inside real teams: connected to your tools, tested on your data, with a human in the loop where it matters.
Install
Works with Claude Code, Claude apps, Codex, Cursor, Gemini CLI, GitHub Copilot, VS Code, OpenCode, Goose, Windsurf. Read the repository before you give any tool access to your data.
npx agentmarket install skill/fridrichmethod-bio-atac-seq-allele-specific-accessibility
Asks which of your tools to add it to (Claude Code, Codex, Cursor, VS Code, Windsurf, Gemini CLI, Claude Desktop) and shows the change first. See https://agentmart.dev/cli.
Get the weekly diff
The weekly diff: one email a week with new agent tools, notable updates and grade changes, plus security alerts for tools you follow. Double opt-in, one-click unsubscribe.
About
Use cases: legal
Reviews
Write a reviewNo reviews yet. Installed it? Reviews come from verified installers only. How reviews work
Permissions: not checked yet.
What's inside
- Skill name
bio-atac-seq-allele-specific-accessibility- Description
- Detect allele-specific chromatin accessibility from ATAC-seq using WASP, GATK ASEReadCounter, or RASQUAL. Use when mapping cis-regulatory genetic variants from heterozygous SNPs, separating cis from trans regulation, building chromatin QTL (caQTL) maps, validating GWAS variant function with allelic imbalance, or detecting reference allele mapping bias before downstream analysis.
- License
- NOASSERTION
- Instructions
- 297 lines in SKILL.md · view on GitHub
Before installing
- Ships executable scripts
Agent Skills spec issues
- name: "bio-atac-seq-allele-specific-accessibility" does not match folder "allele-specific-accessibility"
Files (3)
- SKILL.md
- wasp_ase_pipeline.sh · examples/
- usage-guide.md
The license isn't open source, so the instructions aren't shown here. Read SKILL.md on GitHub
More from FridrichMethod/awesome-skills
- 0.629score
access
FridrichMethod
Manage Discord channel access — approve pairings, edit allowlists, set DM/group policy.
SkillAFreshness: A★ 15Claude Code +9 - 0.625score
access
FridrichMethod
Manage Telegram channel access — approve pairings, edit allowlists, set DM/group policy.
SkillAFreshness: A★ 15Claude Code +9 - 0.625score
academic-pipeline
FridrichMethod
Orchestrator for the full academic research pipeline: research -> write -> integrity check -> review -> revise -> re-review -> re-revise -> final integrity…
SkillAFreshness: A★ 15Claude Code +9 - 0.625score
academic-paper-reviewer
FridrichMethod
Multi-perspective academic paper review with dynamic reviewer personas.
SkillAFreshness: A★ 15Claude Code +9 - 0.625score
access
FridrichMethod
Manage iMessage channel access — approve pairings, edit allowlists, set DM/group policy.
SkillAFreshness: A★ 15Claude Code +9 - 0.625score
academic-paper
FridrichMethod
12-agent academic paper writing pipeline.
SkillAFreshness: A★ 15Claude Code +9 - 0.617score
accessibility-compliance
FridrichMethod
Web accessibility patterns for news and academic sites.
SkillAFreshness: A★ 15Claude Code +9 - 0.598score
aizynthfinder-retrosynthesis
FridrichMethod
AiZynthFinder retrosynthetic route planning (CASP) from AstraZeneca Molecular AI.
SkillBFreshness: B★ 15Claude Code +9 - 0.593score
ai-writing-detox
FridrichMethod
Eliminates AI-generated writing patterns that erode reader trust.
SkillBFreshness: B★ 15Claude Code +9 - 0.581score
academic-writing
FridrichMethod
Scholarly writing and research compliance.
SkillBFreshness: B★ 15Claude Code +9 - 0.548score
adaptyv-bio
FridrichMethod
API + Python SDK for ordering cell-free protein expression and binding assays.
SkillCFreshness: C★ 15Claude Code +9 - 0.548score
aeon
FridrichMethod
scikit-learn compatible Python toolkit for time series ML: classify, cluster, regress, segment, transform with 30+ algorithms (ROCKET, InceptionTime, KNN-DTW…
SkillCFreshness: C★ 15Claude Code +9
Signals
- Stars
- 15
- Forks
- 1
- Open issues
- 2
- Last commit (this folder)
- Jul 19, 2026 (3 months ago)
- Last release
- May 20, 2026 (5 months ago)
From GitHub (fetched Oct 24, 2026).
Details
- License
- NOASSERTION
- Repository
- github.com/FridrichMethod/awesome-skills
- First seen
- Oct 24, 2026
- Last checked
- Oct 24, 2026
- Source
- GitHubgithub-graphql
Same skill elsewhere
Copies of this SKILL.md published by others; search shows only one of them.
More from FridrichMethod
- 0.629score
access
FridrichMethod
Manage Discord channel access — approve pairings, edit allowlists, set DM/group policy.
SkillAFreshness: A★ 15Claude Code +9 - 0.625score
academic-paper-reviewer
FridrichMethod
Multi-perspective academic paper review with dynamic reviewer personas.
SkillAFreshness: A★ 15Claude Code +9 - 0.625score
academic-pipeline
FridrichMethod
Orchestrator for the full academic research pipeline: research -> write -> integrity check -> review -> revise -> re-review -> re-revise -> final integrity…
SkillAFreshness: A★ 15Claude Code +9 - 0.625score
academic-paper
FridrichMethod
12-agent academic paper writing pipeline.
SkillAFreshness: A★ 15Claude Code +9 - 0.625score
access
FridrichMethod
Manage iMessage channel access — approve pairings, edit allowlists, set DM/group policy.
SkillAFreshness: A★ 15Claude Code +9 - 0.625score
access
FridrichMethod
Manage Telegram channel access — approve pairings, edit allowlists, set DM/group policy.
SkillAFreshness: A★ 15Claude Code +9
Done for you
Rather not set it up yourself?
Chalk Labs scopes, builds and runs agents for your team: the task audit, the eval harness, the integrations and the weekly ops report. Fixed scope, priced before we start.
See how we build AI agents →Read the case studies
Chalk Labs is a two-founder AI and growth studio. We build AI agents, CRMs and MVPs for Web3 and AI companies, and have shipped 50+ product and token launches.
- launches shipped
- 50+
- launches shipped
- media placements
- 500+
- media placements
- founders on every account
- 2
- founders on every account
Press we've placed: Forbes · CoinDesk · Decrypt · Cointelegraph · The Block
Rahil Jain, Co-founder, Chalk Labs. Ex-Goldman Sachs engineer. You talk to the person who builds it.
Get bio-atac-seq-allele-specific-accessibility running in your business
Tell us what you want to automate. A founder replies within one working day with a plan, not a pitch deck.
Cite this page
bio-atac-seq-allele-specific-accessibility skill. Agent Mart. https://agentmart.dev/skills/fridrichmethod-bio-atac-seq-allele-specific-accessibility (last updated 2026-10-24)