deep-research
Universal deep research agent team.
Skill by brycewang-stanford
Install
Works with Claude Code, Claude apps, Codex, Cursor, Gemini CLI, GitHub Copilot, VS Code, OpenCode, Goose, Windsurf. Read the repository before you give any tool access to your data.
npx agentmarket install skill/brycewang-stanford-deep-research
Asks which of your tools to add it to (Claude Code, Codex, Cursor, VS Code, Windsurf, Gemini CLI, Claude Desktop) and shows the change first. See https://agentmart.dev/cli.
Get the weekly diff
The weekly diff: one email a week with new agent tools, notable updates and grade changes, plus security alerts for tools you follow. Double opt-in, one-click unsubscribe.
About
Use cases: documents, design, data, research
Reviews
Write a reviewNo reviews yet. Installed it? Reviews come from verified installers only. How reviews work
Permissions
What this skill can do and what it asks for, from its SKILL.md. Checked Oct 25, 2026.
- Tools
- No tools found
- Secrets
- None asked for
- Install scripts
- None found
Network hosts it talks to 1
codeload.github.com· found in install command
Files it touches
~/.claude/skills/deep-research
What's inside
- Skill name
deep-research- Description
- Universal deep research agent team. 13-agent pipeline for rigorous academic research on any topic. 7 modes: full research, quick brief, paper review, lit-review, fact-check, Socratic guided research dialogue, and systematic review with optional meta-analysis. Covers research question formulation, Socratic mentoring, methodology design, systematic literature search, source verification, cross-source synthesis, risk of bias assessment, meta-analysis, APA 7.0 report compilation, editorial review, devil's advocate challenges, ethics review, and post-research literature monitoring. Triggers on: research, deep research, literature review, systematic review, meta-analysis, PRISMA, evidence synthesis, fact-check, guide my research, help me think through, 研究, 深度研究, 文獻回顧, 文獻探討, 系統性回顧, 後設分析, 事實查核, 引導我的研究, 幫我釐清, 幫我想想, 我不確定要研究什麼, 研究方向, 研究主題.
- License
- NOASSERTION
- Metadata
- version: 2.4 · last_updated: 2026-03-27
- Instructions
- 615 lines in SKILL.md · view on GitHub
Agent Skills spec issues
- body: 615 lines (spec recommends under 500)
Files (41)
- SKILL.md
- bibliography_agent.md · agents/
- devils_advocate_agent.md · agents/
- editor_in_chief_agent.md · agents/
- ethics_review_agent.md · agents/
- meta_analysis_agent.md · agents/
- monitoring_agent.md · agents/
- report_compiler_agent.md · agents/
- research_architect_agent.md · agents/
- research_question_agent.md · agents/
- risk_of_bias_agent.md · agents/
- socratic_mentor_agent.md · agents/
- source_verification_agent.md · agents/
- synthesis_agent.md · agents/
- exploratory_research.md · examples/
- fact_check_mode.md · examples/
- handoff_to_paper.md · examples/
- policy_analysis.md · examples/
- review_mode.md · examples/
- socratic_guided_research.md · examples/
- systematic_review.md · examples/
- apa7_style_guide.md · references/
- equator_reporting_guidelines.md · references/
- ethics_checklist.md · references/
- failure_paths.md · references/
- interdisciplinary_bridges.md · references/
- irb_decision_tree.md · references/
- literature_monitoring_strategies.md · references/
- logical_fallacies.md · references/
- methodology_patterns.md · references/
- mode_selection_guide.md · references/
- preregistration_guide.md · references/
- socratic_questioning_framework.md · references/
- source_quality_hierarchy.md · references/
- systematic_review_toolkit.md · references/
- evidence_assessment_template.md · templates/
- literature_matrix_template.md · templates/
- preregistration_template.md · templates/
- prisma_protocol_template.md · templates/
- prisma_report_template.md · templates/
- research_brief_template.md · templates/
The license isn't open source, so the instructions aren't shown here. Read SKILL.md on GitHub
More from brycewang-stanford/Auto-Empirical-Research-Skills
- 0.746score
bayesian-workflow
[Alexandre Andorra](https://alexandorra.github.io/)
Opinionated Bayesian modeling workflow with PyMC and ArviZ.
SkillCFreshness: C★ 4.8KClaude Code +9 - 0.746score
causal-inference
[Alexandre Andorra](https://alexandorra.github.io/)
Production-grade Bayesian causal inference with PyMC, CausalPy, and DoWhy.
SkillCFreshness: C★ 4.8KClaude Code +9 - 0.740score
latex-to-quarto
Christopher T. Kenny
Converts LaTeX article-class .tex documents to Quarto .qmd format for multi-format publishing (HTML, PDF, Word).
SkillCFreshness: C★ 4.8KClaude Code +9 - 0.738score
stat-writing
stat-writing-one-skill
End-to-end statistical writing assistant for LaTeX - draft title/abstract/keywords, expand outlines into sections, audit manuscripts, write reviewer reports…
SkillCFreshness: C★ 4.8KClaude Code +9 - 0.736score
medical-imaging-review
user
Write comprehensive literature reviews for medical imaging AI research.
SkillCFreshness: C★ 4.8KClaude Code +9 - 0.735score
pseudo-merge
Christopher T. Kenny
Takes a proofread or apsa-style report file (or any markdown file using **Original:** / **Recommended:** syntax) and rewrites the original source file with…
SkillCFreshness: C★ 4.8KClaude Code +9 - 0.735score
proofread
Christopher T. Kenny
Expert copy editor for Quarto (.qmd) files.
SkillCFreshness: C★ 4.8KClaude Code +9 - 0.735score
assess-outline
Christopher T. Kenny
Assesses a research paper outline (.qmd file) against structured criteria from Kosuke Imai's empirical research guide.
SkillCFreshness: C★ 4.8KClaude Code +9 - 0.735score
paper-summary
Christopher T. Kenny
Writes expert academic paper summaries for social science research, particularly political science and applied statistics.
SkillCFreshness: C★ 4.8KClaude Code +9 - 0.735score
apsa-style
Christopher T. Kenny
APSA style checker for Quarto (.qmd) files.
SkillCFreshness: C★ 4.8KClaude Code +9 - 0.735score
markdown-unwrap
Christopher T. Kenny
Unwraps hard-wrapped markdown files so that each sentence ends with a newline instead of mid-sentence line breaks.
SkillCFreshness: C★ 4.8KClaude Code +9 - 0.735score
quarto-clean
Christopher T. Kenny
Cleans a Quarto (.qmd) file by replacing LaTeX holdovers with proper Quarto/Pandoc syntax so the document renders correctly to HTML, PDF (Typst/LaTeX), and…
SkillCFreshness: C★ 4.8KClaude Code +9
Signals
- Stars
- 4,757
- Forks
- 556
- Open issues
- 1
- Last commit (this folder)
- Apr 3, 2026 (6 months ago)
- Last release
- Jul 2, 2026 (3 months ago)
From GitHub (fetched Oct 24, 2026).
Details
- Version
- 2.4
- License
- NOASSERTION
- Website
- copaper.ai
- First seen
- Oct 24, 2026
- Last checked
- Oct 24, 2026
- Source
- GitHubgithub-graphql
Same skill elsewhere
Copies of this SKILL.md published by others; search shows only one of them.
More from brycewang-stanford
- 0.620score
auto-empirical-research-skills
brycewang-stanford
Route empirical-research requests through the Auto-Empirical Research Skills catalog when this whole repository is installed as one skill in Codex, CodeBuddy…
SkillAFreshness: A★ 4.8KClaude Code +9 - 0.558score
scientific-writing
brycewang-stanford
Core skill for the deep research and writing tool.
SkillCFreshness: C★ 4.8KClaude Code +9 - 0.558score
ml-paper-writing
brycewang-stanford
Write publication-ready ML/AI/Systems papers for NeurIPS, ICML, ICLR, ACL, AAAI, COLM, OSDI, NSDI, ASPLOS, SOSP.
SkillCFreshness: C★ 4.8KClaude Code +9 - 0.555score
hypothesis-generation
brycewang-stanford
Structured hypothesis formulation from observations.
SkillCFreshness: C★ 4.8KClaude Code +9 - 0.554score
submission-guide
brycewang-stanford
This skill covers academic journal submission, referee responses, and revision management.
SkillCFreshness: C★ 4.8KClaude Code +9 - 0.554score
education-data-source-nccs
brycewang-stanford
NCCS — Form 990 data for private nonprofit colleges (Portal: IPEDS-matched, 1993-2016).
SkillCFreshness: C★ 4.8KClaude Code +9
Cite this page
deep-research skill. Agent Mart. https://agentmart.dev/skills/brycewang-stanford-deep-research (last updated 2026-10-24)