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quarto-clean

Cleans a Quarto (.qmd) file by replacing LaTeX holdovers with proper Quarto/Pandoc syntax so the document renders correctly to HTML, PDF (Typst/LaTeX), and…

Skill by Christopher T. Kenny

IndexedNOASSERTION★ 4,757
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Works with Claude Code, Claude apps, Codex, Cursor, Gemini CLI, GitHub Copilot, VS Code, OpenCode, Goose, Windsurf. Read the repository before you give any tool access to your data.

npx agentmarket install skill/brycewang-stanford-quarto-clean

Asks which of your tools to add it to (Claude Code, Codex, Cursor, VS Code, Windsurf, Gemini CLI, Claude Desktop) and shows the change first. See https://agentmart.dev/cli.

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About

Cleans a Quarto (.qmd) file by replacing LaTeX holdovers with proper Quarto/Pandoc syntax so the document renders correctly to HTML, PDF (Typst/LaTeX), and Word. Fixes citations (\citep → [@key]), cross-references (\ref → @label), figures (\includegraphics → markdown), tables, text formatting (\textbf → **bold**), inline math (\( \) → $ $), hyperlinks (\href → [text](url)), footnotes (\footnote → ^[]), list environments, section headings, and R Markdown chunk options (dot-style → #| YAML). Use when asked to clean, fix, modernize, or port a Quarto or R Markdown document; when LaTeX commands appear in a .qmd file; when a document fails to render to Word or Typst; or when citations/cross-references do not appear in non-LaTeX output.

Use cases: documents, frontend

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Permissions

What this skill can do and what it asks for, from its SKILL.md. Checked Oct 25, 2026.

Tools
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Secrets
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Install scripts
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Network hosts it talks to 1

  • codeload.github.com · found in install command

Files it touches

  • ~/.claude/skills/quarto-clean

What's inside

Skill name
quarto-clean
Description
Cleans a Quarto (.qmd) file by replacing LaTeX holdovers with proper Quarto/Pandoc syntax so the document renders correctly to HTML, PDF (Typst/LaTeX), and Word. Fixes citations (\citep → [@key]), cross-references (\ref → @label), figures (\includegraphics → markdown), tables, text formatting (\textbf → **bold**), inline math (\( \) → $ $), hyperlinks (\href → [text](url)), footnotes (\footnote → ^[]), list environments, section headings, and R Markdown chunk options (dot-style → #| YAML). Use when asked to clean, fix, modernize, or port a Quarto or R Markdown document; when LaTeX commands appear in a .qmd file; when a document fails to render to Word or Typst; or when citations/cross-references do not appear in non-LaTeX output.
License
NOASSERTION
Metadata
author: Christopher T. Kenny · version: 1.1
Instructions
360 lines in SKILL.md · view on GitHub

Files (1)

  • SKILL.md

The license isn't open source, so the instructions aren't shown here. Read SKILL.md on GitHub

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    Stars
    4,757
    Forks
    556
    Open issues
    1
    Last commit (this folder)
    Apr 3, 2026 (6 months ago)
    Last release
    Jul 2, 2026 (3 months ago)

    From GitHub (fetched Oct 24, 2026).

    Details

    Version
    1.1
    License
    NOASSERTION
    Repository
    github.com/brycewang-stanford/Auto-Empirical-Research-Skills
    Website
    copaper.ai
    First seen
    Oct 24, 2026
    Last checked
    Oct 24, 2026
    Source
    GitHubgithub-graphql

    More from Christopher T. Kenny

    Cite this page

    quarto-clean skill. Agent Mart. https://agentmart.dev/skills/brycewang-stanford-quarto-clean (last updated 2026-10-24)