deeppapernote

Generate a high-quality deep-reading note for a single paper and write it into an Obsidian-style vault.

IndexedLicense unknown★ 2

Install

Works with Claude Code, Claude apps, Codex, Cursor, Gemini CLI, GitHub Copilot, VS Code, OpenCode, Goose, Windsurf. Read the repository before you give any tool access to your data.

npx agentmarket install skill/teng-bio-deeppapernote

Asks which of your tools to add it to (Claude Code, Codex, Cursor, VS Code, Windsurf, Gemini CLI, Claude Desktop) and shows the change first. See https://agentmart.dev/cli.

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About

Generate a high-quality deep-reading note for a single paper and write it into an Obsidian-style vault. Use when the user gives a paper title, DOI, URL, arXiv ID, Zotero item, or local PDF and wants a polished Markdown note with strong structure, evidence-based analysis, and figure placeholders.

Use cases: documents, writing, research, productivity

Reviews

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Permissions

What this skill can do and what it asks for, from its SKILL.md. Checked Oct 25, 2026.

Tools: No tools found
Secrets: None asked for
Install scripts: None found
Runs as: Python package

Network hosts it talks to 1

codeload.github.com · found in install command

Files it touches

~/.claude/skills/deeppapernote

What's inside

Skill name: deeppapernote
Description: Generate a high-quality deep-reading note for a single paper and write it into an Obsidian-style vault. Use when the user gives a paper title, DOI, URL, arXiv ID, Zotero item, or local PDF and wants a polished Markdown note with strong structure, evidence-based analysis, and figure placeholders.
License: unknown
Instructions: 264 lines in SKILL.md · view on GitHub

Before installing

Ships executable scripts

Files (60)

AGENTS.md
CHANGELOG.md
CLAUDE.md
LICENSE
README.md
README.zh-CN.md
SKILL.md
openai.yaml · agents/
hero-academic.svg · assets/
note_template.md · assets/
usage-example.png · assets/
pyproject.toml
architecture.md · references/
deep-analysis.md · references/
domain_rules.yaml · references/
evidence-first.md · references/
figure-placement.md · references/
final-writing.md · references/
metadata-sources.md · references/
model-synthesis.md · references/
note-quality.md · references/
obsidian-format.md · references/
paper-types.md · references/
workflow.md · references/
build_synthesis_bundle.py · scripts/
check_environment.py · scripts/
citation_links.py · scripts/
collect_metadata.py · scripts/
common.py · scripts/
contracts.py · scripts/
create_input_record.py · scripts/
extract_evidence.py · scripts/
extract_pdf_assets.py · scripts/
extract_source_text.py · scripts/
fetch_pdf.py · scripts/
lint_grounding.py · scripts/
lint_note.py · scripts/
locate_zotero_attachment.py · scripts/
materialize_figure_asset.py · scripts/
plan_figure_table_decisions.py · scripts/
plan_figures.py · scripts/
resolve_paper.py · scripts/
run_pipeline.py · scripts/
write_obsidian_note.py · scripts/
conftest.py · tests/
test_build_synthesis_bundle_contract.py · tests/
test_citation_links.py · tests/
test_cli_fallback.py · tests/
test_common.py · tests/
test_contracts_consistency.py · tests/
test_extract_evidence.py · tests/
test_extract_pdf_assets_quality.py · tests/
test_extract_source_text.py · tests/
test_fetch_pdf.py · tests/
test_figure_table_decisions.py · tests/
test_lint_grounding.py · tests/
test_lint_note.py · tests/
test_no_legacy_rewrite_helpers.py · tests/
test_plan_figures.py · tests/
test_run_pipeline_manifest.py · tests/

The license isn't open source, so the instructions aren't shown here. Read SKILL.md on GitHub

Signals

Stars: 2
Forks: 0
Open issues: 0
Last commit (this folder): Jun 25, 2026 (4 months ago)

From GitHub (fetched Oct 24, 2026).

Details

License: License unknown
Repository: github.com/Teng-bio/codex-skills-hub
First seen: Oct 24, 2026
Last checked: Oct 24, 2026
Source: GitHub github-graphql

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Cite this page

deeppapernote skill. Agent Mart. https://agentmart.dev/skills/teng-bio-deeppapernote (last updated 2026-10-24)