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biology

Handle biology tasks: protein property analysis, peptide calculations, DNA/RNA sequence analysis, codon optimization, protein solubility prediction, sequence…

Skill by science-agent

IndexedMIT
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Works with Claude Code, Claude apps, Codex, Cursor, Gemini CLI, GitHub Copilot, VS Code, OpenCode, Goose, Windsurf. Read the repository before you give any tool access to your data.

npx agentmarket install skill/suhyeong10-biology

Asks which of your tools to add it to (Claude Code, Codex, Cursor, VS Code, Windsurf, Gemini CLI, Claude Desktop) and shows the change first. See https://agentmart.dev/cli.

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About

Handle biology tasks: protein property analysis, peptide calculations, DNA/RNA sequence analysis, codon optimization, protein solubility prediction, sequence alignment, ORF finding, and molecular biology calculations.

Reviews

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Permissions

What this skill can do and what it asks for, from its SKILL.md. Checked Oct 25, 2026.

Tools
No tools found
Secrets
None asked for
Install scripts
None found

Network hosts it talks to 1

  • codeload.github.com · found in install command

Files it touches

  • ~/.claude/skills/biology

Tools it pre-approves 1

From allowed-tools in SKILL.md: the agent may use these without asking you each time.

  • run_scitool

What's inside

Skill name
biology
Description
Handle biology tasks: protein property analysis, peptide calculations, DNA/RNA sequence analysis, codon optimization, protein solubility prediction, sequence alignment, ORF finding, and molecular biology calculations.
License
MIT
Allowed tools
run_scitool
Metadata
author: science-agent · version: 1.0
Instructions
36 lines in SKILL.md · view on GitHub

Files (1)

  • SKILL.md

SKILL.md (first lines)

# Biology Skill

Use this skill for biology and biochemistry tasks.

## Protein Analysis
- `ComputeProtPara(sequence)` — pI, MW, instability index, GRAVY
- `ComputePiMw(sequence)` — Isoelectric point and molecular weight
- `ComputeExtinctionCoefficient(sequence)` — Extinction coefficient
- `ComputeProtScale(sequence)` — Hydrophilicity/hydrophobicity profile
- `AminoAcidStatistics(sequence)` — Amino acid composition

## Peptide Tools
- `PeptideWeightCalculator(sequence)` — Peptide weight
- `PeptideFormulaCalculator(sequence)` — Peptide formula
- `ConvertingPeptide2SMILES(sequence)` — Peptide to SMILES
- `ProteaseDigestion(sequence)` — Protease digestion sites

## DNA/RNA Tools
- `TranslateDNAtoAminoAcidSequence(dna)` — DNA to protein
- `GetReverseComplement(dna)` — Reverse complement
- `ORFFind(dna)` — Open reading frames
- `RepeatDNASequenceSearch(dna)` — Repeat sequences
- `DNAMolecularWeightCalculator(dna)` — DNA molecular weight
- `CpGIslandPrediction(dna)` — CpG island prediction

## Sequence Alignment
- `DoubleSequenceGlobalAlignment(seq1, seq2)` — Global alignment
- `DoubleSequenceLocalAlignment(seq1, seq2)` — Local alignment
- `SequenceSimilarityCalculator(seq1, seq2)` — Similarity score

## Workflow
1. For protein queries: start with `ComputeProtPara` for basic properties
2. For DNA queries: use `TranslateDNAtoAminoAcidSequence` then protein tools
3. Use `run_scitool` with tool name and sequence as input string

From suhyeong10/Science-Agent, MIT.

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Forks
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Last commit (this folder)
Apr 22, 2026 (6 months ago)

From GitHub (fetched Oct 24, 2026).

Details

Version
1.0
License
MIT
Repository
github.com/suhyeong10/Science-Agent
First seen
Oct 24, 2026
Last checked
Oct 24, 2026
Source
GitHubgithub-graphql

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Cite this page

biology skill. Agent Mart. https://agentmart.dev/skills/suhyeong10-biology (last updated 2026-10-24)