duckhts-wasm-debugging
Use when debugging DuckHTS in webR, duckdb-wasm, or Emscripten/browser workers.
Skill by sounkou-bioinfo
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Install
Works with Claude Code, Claude apps, Codex, Cursor, Gemini CLI, GitHub Copilot, VS Code, OpenCode, Goose, Windsurf. Read the repository before you give any tool access to your data.
npx agentmarket install skill/sounkou-bioinfo-duckhts-wasm-debugging
Asks which of your tools to add it to (Claude Code, Codex, Cursor, VS Code, Windsurf, Gemini CLI, Claude Desktop) and shows the change first. See https://agentmart.dev/cli.
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About
Reviews
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Permissions
What this skill can do and what it asks for, from its SKILL.md. Checked Oct 25, 2026.
- Tools
- No tools found
- Secrets
- None asked for
- Install scripts
- None found
Network hosts it talks to 1
codeload.github.com· found in install command
Files it touches
~/.claude/skills/duckhts-wasm-debugging
What's inside
- Skill name
duckhts-wasm-debugging- Description
- Use when debugging DuckHTS in webR, duckdb-wasm, or Emscripten/browser workers.
- License
- MIT
- Instructions
- 26 lines in SKILL.md · view on GitHub
Files (1)
- SKILL.md
SKILL.md (first lines)
# DuckHTS wasm debugging ## Runtime identity Distinguish: - host build artifacts; - the built `Rduckhts_<Version>.tgz` used by webR; - a webR package runtime; - a duckdb-wasm extension side module and worker/browser runtime. Reproduce in the actual target runtime and inspect the artifact actually loaded there. A host `.Rcheck` file with a wasm-looking name is not evidence. ## Checks - Preserve Emscripten linker flags and DuckDB init-symbol exports. - Verify the wasm export section; `strings` or a symbol table alone is insufficient. - Gate wasm behavior on real Emscripten target detection. - Keep the canonical socket/i64 compatibility shim in `src/include/wasm_socket_compat.h`. - Keep htslib curl/S3/GCS disabled unless the browser transport model changes. - Browser HTTP uses `src/wasm_http_hfile.c`: same-origin works; remote URLs require CORS; proxy environment variables do not control XHR/fetch. - Validate packaging, worker loading, SQL execution, and error reporting, not only compilation. Do not diagnose an init-export failure as package installation success, or webR behavior as proof for duckdb-wasm. Follow the repository's browser/container workflow and then run the ordinary DuckHTS package gates for shared code.
From sounkou-bioinfo/pi-skills, MIT.
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Signals
- Stars
- 2
- Forks
- 1
- Open issues
- 2
- Last commit (this folder)
- Sep 6, 2026 (1 month ago)
From GitHub (fetched Oct 24, 2026).
Details
- License
- MIT
- Repository
- github.com/sounkou-bioinfo/pi-skills
- First seen
- Oct 24, 2026
- Last checked
- Oct 24, 2026
- Source
- GitHubgithub-graphql
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- 0.598score
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Use for consequential architecture review, exploratory coding and theory-building when requirements or behavior are uncertain, technical issue refinement, and…
SkillAFreshness: A★ 2Claude Code +9 - 0.563score
bioinformatics-rewrites
sounkou-bioinfo
Use when reusing, binding, porting, or redesigning a bioinformatics implementation - reuse decisions, native FFI/bindings, compatibility with a named upstream…
SkillBFreshness: B★ 2Claude Code +9 - 0.561score
duckvep-design
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Use when designing DuckDB-native variant consequence prediction, including transcript and haplotype semantics.
SkillBFreshness: B★ 2Claude Code +9 - 0.561score
duckqc-design
sounkou-bioinfo
Use when designing DuckDB-native sequencing QC metrics, reductions, or compatibility outputs.
SkillBFreshness: B★ 2Claude Code +9 - 0.561score
s7-development
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Use when implementing or changing R S7 classes, properties, methods, or package integration.
SkillBFreshness: B★ 2Claude Code +9 - 0.559score
duckdb-c-extension
sounkou-bioinfo
Use for C DuckDB extension architecture, ownership, concurrency, API compatibility, vendoring, function catalogs, or packaging and exposing the extension…
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duckhts-wasm-debugging skill. Agent Mart. https://agentmart.dev/skills/sounkou-bioinfo-duckhts-wasm-debugging (last updated 2026-10-24)