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This entry duplicates ensembl-database, which is the one we list in search.

ensembl-database

Query the Ensembl database to resolve gene, transcript, and protein IDs, fetch genomic or protein sequences, retrieve gene structures (exons), and get variant…

Skill by myoung906

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Works with Claude Code, Claude apps, Codex, Cursor, Gemini CLI, GitHub Copilot, VS Code, OpenCode, Goose, Windsurf. Read the repository before you give any tool access to your data.

npx agentmarket install skill/myoung906-ensembl-database

Asks which of your tools to add it to (Claude Code, Codex, Cursor, VS Code, Windsurf, Gemini CLI, Claude Desktop) and shows the change first. See https://agentmart.dev/cli.

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About

Query the Ensembl database to resolve gene, transcript, and protein IDs, fetch genomic or protein sequences, retrieve gene structures (exons), and get variant consequence and effect predictions (VEP). Use this skill as a primary ID translator, genomic sequence database and variant effect prediction tool.

Use cases: backend

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What's inside

Skill name
ensembl-database
Description
Query the Ensembl database to resolve gene, transcript, and protein IDs, fetch genomic or protein sequences, retrieve gene structures (exons), and get variant consequence and effect predictions (VEP). Use this skill as a primary ID translator, genomic sequence database and variant effect prediction tool.
License
unknown
Instructions
194 lines in SKILL.md · view on GitHub

Before installing

  • Ships executable scripts

Files (4)

  • SKILL.md
  • citation.bib · references/
  • ensembl_rest_api_reference.md · references/
  • ensembl_api.py · scripts/

The license isn't open source, so the instructions aren't shown here. Read SKILL.md on GitHub

Signals

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Last commit (this folder)
Aug 17, 2026 (2 months ago)

From GitHub (fetched Oct 24, 2026).

Details

License
License unknown
First seen
Oct 24, 2026
Last checked
Oct 24, 2026

Same skill elsewhere

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Cite this page

ensembl-database skill. Agent Mart. https://agentmart.dev/skills/myoung906-ensembl-database (last updated 2026-10-24)