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This entry duplicates pubmed-database, which is the one we list in search.

pubmed-database

Search PubMed for scientific literature, including published clinical trials.

Skill by fegome90-cmd

IndexedLicense unknown
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Install

Works with Claude Code, Claude apps, Codex, Cursor, Gemini CLI, GitHub Copilot, VS Code, OpenCode, Goose, Windsurf. Read the repository before you give any tool access to your data.

npx agentmarket install skill/fegome90-cmd-pubmed-database

Asks which of your tools to add it to (Claude Code, Codex, Cursor, VS Code, Windsurf, Gemini CLI, Claude Desktop) and shows the change first. See https://agentmart.dev/cli.

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About

Search PubMed for scientific literature, including published clinical trials. Fetch abstracts and full text. Link published research to biological databases (gene, protein, nucleotide, PubChem) to discover associations between papers and specific compounds or genes. Verify medical spelling, match raw citations, and cache result sets for bulk processing. Interfaces NCBI E-utilities and PMC BioC APIs.

Use cases: backend, research

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What's inside

Skill name
pubmed-database
Description
Search PubMed for scientific literature, including published clinical trials. Fetch abstracts and full text. Link published research to biological databases (gene, protein, nucleotide, PubChem) to discover associations between papers and specific compounds or genes. Verify medical spelling, match raw citations, and cache result sets for bulk processing. Interfaces NCBI E-utilities and PMC BioC APIs.
License
unknown
Instructions
190 lines in SKILL.md · view on GitHub

Before installing

  • Ships executable scripts

Agent Skills spec issues

  • name: "pubmed-database" does not match folder "pubmed_database"
  • body: contains an absolute path from the author's machine

Files (10)

  • SKILL.md
  • advanced-linking.md · references/
  • advanced-search.md · references/
  • bulk-workflows.md · references/
  • citation-matching.md · references/
  • cross-database-linking.md · references/
  • fetch-and-resolve.md · references/
  • search-and-discovery.md · references/
  • utilities.md · references/
  • pubmed_api.py · scripts/

The license isn't open source, so the instructions aren't shown here. Read SKILL.md on GitHub

More from fegome90-cmd/paper-writer

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Last commit (this folder)
Jun 9, 2026 (4 months ago)

From GitHub (fetched Oct 24, 2026).

Details

License
License unknown
Repository
github.com/fegome90-cmd/paper-writer
First seen
Oct 24, 2026
Last checked
Oct 24, 2026
Source
GitHubgithub-graphql

Same skill elsewhere

Copies of this SKILL.md published by others; search shows only one of them.

More from fegome90-cmd

Cite this page

pubmed-database skill. Agent Mart. https://agentmart.dev/skills/fegome90-cmd-pubmed-database (last updated 2026-10-24)