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surface-adsorption

Surface and adsorbate workflow for CO/Pt(111), adsorption energies, site/orientation comparison, and same-functional accounting.

Skill by chouyoudou

IndexedMIT
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Works with Claude Code, Claude apps, Codex, Cursor, Gemini CLI, GitHub Copilot, VS Code, OpenCode, Goose, Windsurf. Read the repository before you give any tool access to your data.

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About

Surface and adsorbate workflow for CO/Pt(111), adsorption energies, site/orientation comparison, and same-functional accounting.

Use cases: productivity, finance

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Permissions

What this skill can do and what it asks for, from its SKILL.md. Checked Oct 25, 2026.

Tools
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Network hosts it talks to 1

  • codeload.github.com · found in install command

Files it touches

  • ~/.claude/skills/surface-adsorption

What's inside

Skill name
surface-adsorption
Description
Surface and adsorbate workflow for CO/Pt(111), adsorption energies, site/orientation comparison, and same-functional accounting.
License
MIT
Instructions
23 lines in SKILL.md · view on GitHub

Files (1)

  • SKILL.md

SKILL.md (first lines)

# Surface Adsorption

## Procedure

1. Generate or identify the clean slab, isolated adsorbate, and adsorbed slab.
2. Use the same functional and pseudopotential family for every component.
3. For CO/Pt(111) p(2x2), compare relevant sites and orientations explicitly.
4. Compute adsorption energy from finished component energies with
   `matsci_compute_adsorption_energy`.
5. Rank site/orientation energies with `matsci_compare_adsorption_sites` and
   report the energy-difference sign convention.

## Pitfalls

- Do not compare PBE components to BEEF-vdW components.
- Do not infer an adsorption energy from a slab+adsorbate calculation alone.
- Keep coverage, slab size, fixed layers, and orientation labels in artifacts.

## Verification

Run `matsci_run_harness` with suite `copt`.

From chouyoudou/matsci-mcp, MIT.

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Last commit (this folder)
Apr 27, 2026 (6 months ago)

From GitHub (fetched Oct 24, 2026).

Details

License
MIT
First seen
Oct 24, 2026
Last checked
Oct 24, 2026

Same skill elsewhere

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surface-adsorption skill. Agent Mart. https://agentmart.dev/skills/chouyoudou-surface-adsorption (last updated 2026-10-24)