“knowledge graphs”

Use when you need to connect to the SciGraph SCP server for Biomedical-Drug (DREAMwalk multi-layer heterogeneous biomedical knowledge graph for drug…

Use when you need to connect to the SciGraph SCP server for DTINet (Drug-Target Interaction Network knowledge graph for predicting novel drug–target…

Use when you need to connect to the SciGraph SCP server for the DDKG biomedical knowledge graph (drug–drug interaction prediction) and call its MCP tools…

Use when you need to connect to the SciGraph SCP server for E-Coli (antibiotic resistance knowledge graph; KIDS framework) and call its MCP tools…

Surface recurring themes, connections, and patterns from the knowledge graph.

Use when you need to connect to the SciGraph SCP server for Healx (rare disease drug repositioning biomedical knowledge graph by Healx Ltd.) and call its MCP…

Use when you need to connect to the SciGraph SCP server for IDP-KG (Intrinsically Disordered Protein Knowledge Graph) and call its MCP tools (query_cypher…

Use when you need to connect to the SciGraph SCP server for AEQG-Physics (AEQG-MCQ-Distractors-Physics high-school physics concept-map knowledge graph for MCQ…

Use when needing global or relational understanding of codebases or knowledge corpora.

Guides the creation of a Go HTTP server and Cytoscape.js/Marked.js frontend to visualize and traverse OKF-based knowledge graphs.

Bootstrap and verify the Hive Mind nervous system — lucent (vector store + knowledge graph) and comms (gateway, broker, session manager).

Use when deciding where knowledge goes or reading/writing durable docs: AGENTS.md, .context/, KB, docs/, and work directories.

Generate or refresh a graphify knowledge-graph codemap of the current repo, gitignore the machine-specific/regenerable pieces, and commit only the portable…

Use codebase-memory-mcp for structural code intelligence through a local MCP knowledge graph: symbols, references, call chains, architecture, impact analysis…

Build a deep knowledge graph with function-level control flow — capturing every if/else branch, loop, throw, and conditional call with zero LLM token waste on…

Browse and explore the knowledge graph interactively

Use when extracting structured information from text - named entity recognition, relation extraction, coreference resolution, knowledge graph construction…

Graph database schema design and data modeling expert.

Elite AI context engineering specialist mastering dynamic context management, vector databases, knowledge graphs, and intelligent memory systems.

Git-Notes-Based knowledge graph memory system.

Use when asked what an agent-qa run did, why a step passed or failed, what a run's screenshots, console or network showed, what knowledge agent-qa learned or…

Sync the CodeEagle knowledge graph with latest code changes.

Use for any question about a codebase, its architecture, file relationships, or project content — especially when graphify-out/ exists, where the question…

Review code changes and diffs against codebase conventions using CodeEagle's knowledge graph.