UniProt MCP

Read-only UniProtKB via MCP (entries, sequences, features, GO, taxonomy, ID mapping).

Connector by josefdc · GitHub account verified by the MCP Registry

IndexedMITLocal (stdio)

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Install

Works with Claude Code, Codex, VS Code, Cursor, Windsurf, Claude Desktop. Read the repository before you give any tool access to your data.

npx agentmarket install connector/josefdc-uniprot-mcp

Asks which of your tools to add it to (Claude Code, Codex, Cursor, VS Code, Windsurf, Gemini CLI, Claude Desktop) and shows the change first. See https://agentmart.dev/cli.

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About

Read-only UniProtKB via MCP (entries, sequences, features, GO, taxonomy, ID mapping).

Reviews

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No reviews yet. Installed it? Reviews come from verified installers only. How reviews work

Permissions

What this server can do and what it asks for, from its tool list and install config. Checked Oct 25, 2026.

Tools: 4 read · 0 write · 0 delete · 1 not yet classified
Secrets: None asked for
Install scripts: Not scanned yet
Runs as: Python package

Tools by what they do 5

Read from the source code; the running server may list different tools.

Read 4 · Look things up without changing anything.

fetch_entry
fetch_entry_flatfile
get_sequence
search_uniprot

Not yet classified 1 · We could not tell from the name and description.

map_ids

Tools (5)

Read from the source code; the running server may differ. Descriptions are the server’s own words; hidden characters are shown as [U+…].

fetch_entry
Return a structured UniProt entry.
fetch_entry_flatfile
Return the UniProt flatfile (txt or fasta) for a specific entry version.
get_sequence
Return only the sequence metadata for an accession.
map_ids
Map identifiers between UniProt-supported namespaces.
search_uniprot
Search UniProtKB and return curated hits.

Signals

Weekly downloads: 33
Last release: Oct 27, 2025 (1 year ago)
Last package publish: Oct 27, 2025 (1 year ago)

From the package registry.

Details

Registry name: io.github.josefdc/uniprot-mcp
Version: 0.1.0
Auth: No auth
Packages: pypi uniprot-mcp
License: MIT
First seen: Oct 24, 2026
Last checked: Oct 24, 2026
Source: Official MCP Registry

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Cite this page

UniProt MCP. Agent Mart. https://agentmart.dev/connectors/josefdc-uniprot-mcp (last updated 2026-10-24)