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Claidex MCP

Biomedical failure intelligence platform for terminated trials and translational analysis.

Connector by claidex.comOfficial · Domain verified by the MCP Registry

IndexedLicense unknownLocal (stdio)Remote (HTTP)
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Install

Works with Claude Code, VS Code, Codex, Cursor, Windsurf, Claude Desktop. Read the repository before you give any tool access to your data.

npx agentmarket install connector/claidex-com-failure-intelligence

Asks which of your tools to add it to (Claude Code, Codex, Cursor, VS Code, Windsurf, Gemini CLI, Claude Desktop) and shows the change first. See https://agentmart.dev/cli.

Remote endpoint

  • https://app.claidex.com/api/mcp Remote (HTTP)

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About

Biomedical failure intelligence platform for terminated trials and translational analysis.

No reviews yet. Installed it? Reviews come from verified installers only. How reviews work

Permissions

What this server can do and what it asks for, from its tool list and install config. Checked Oct 25, 2026.

Tools
20 read · 1 write · 0 delete · 3 not yet classified
Secrets
2 (API keys, tokens or passwords)
Install scripts
Not scanned yet
Runs as
Node.js package

Tools by what they do 24

From the running server's own tool list (tools/list) on Oct 25, 2026.

Read 20 · Look things up without changing anything.

  • claidex_capabilities
  • claidex_claim_risk_matrix
  • claidex_health_snapshot
  • claidex_tool_catalog
  • consult_specialist_model
  • fetch
  • fetch_research_url
  • get_claim_content
  • query_chembl
  • query_clinicaltrials
  • query_failure_graph
  • query_openfda
Show 8 more tools
  • query_opentargets
  • query_package_registry
  • rank_documents_by_embedding
  • search
  • search_claims
  • search_preprint_flags
  • search_pubmed
  • web_search

Write 1 · Create, change, send or run things.

  • run_computation

Not yet classified 3 · We could not tell from the name and description.

  • claidex_research_prompt
  • rerank_documents
  • run_statistical_analysis

Secrets and settings it asks for

Secrets: values you paste in that let it act as you.

  • Authorization
  • CLAIDEX_MCP_API_KEY

Other settings (environment variables or headers).

  • CLAIDEX_MCP_URL

Network hosts it talks to 1

  • app.claidex.com · found in remote endpoint, install command

Files it touches

  • Any path the agent passes to its tools

Tools (24)

As the server listed them on Oct 25, 2026. Descriptions are the server’s own words; hidden characters are shown as [U+…].

  • claidex_capabilitiesClaidex MCP Capabilities

    Return the Claidex MCP feature map, configured storage/model providers, safety controls, resources, prompts, and tool counts.

  • claidex_claim_risk_matrixClaidex Claim Risk Matrix

    Search claims and summarize MRS bands, trial phases, failure archetypes, and high-risk programs for rapid diligence.

  • claidex_health_snapshotClaidex Health Snapshot

    Return Sentinel metrics, coverage, graph counts, recent automation runs, MRS bands, and preprint-watch summaries.

  • claidex_research_promptClaidex Research Prompt

    Compose a rigorous, reusable investigation prompt that tells an MCP client which Claidex tools and resources to use.

  • claidex_tool_catalogClaidex Tool Catalog

    Return the complete MCP tool catalog, optionally including full input schemas and filtering native versus agent-backed tools.

  • consult_specialist_modelConsult Specialist Model

    Ask a specialist Gateway model for code, database/tool-calling, statistics, literature, preprint, or mechanistic synthesis support. Use for hard subproblems, second opinions, code generation/review, or complex synthesis.

  • fetchFetch Claidex Result

    Fetch a specific result returned by search. This compatibility tool supports OpenAI and ChatGPT remote MCP retrieval flows.

  • fetch_research_urlFetch Research Url

    Fetch a public HTTPS research URL, JSON API response, package metadata endpoint, documentation page, or dataset preview. Blocks private/internal hosts and truncates large responses.

  • get_claim_contentGet Claim Content

    Retrieve the complete text content of a specific Claidex Claim by its slug. Use this when you need to read the full post-mortem analysis, including hypothesis, failure mechanism, and prevention analysis.

  • query_chemblQuery Chembl

    Look up a drug or compound in ChEMBL. Returns mechanism of action, primary target, ChEMBL ID, max development phase, molecular type, and synonyms.

  • query_clinicaltrialsQuery Clinicaltrials

    Search ClinicalTrials.gov for clinical trials. Can search by drug name, condition, target, or NCT ID. Returns trial status, phase, sponsor, primary endpoints, and why_stopped if terminated.

  • query_failure_graphQuery Failure Graph

    Query the Claidex failure graph for a specific gene target. Returns the Mechanism Risk Score (MRS), failure counts by phase and archetype, and all related claim slugs.

  • query_openfdaQuery Openfda

    Query the FDA FAERS database for adverse event signals for a drug. Returns top adverse event terms, serious case count, and death count.

  • query_opentargetsQuery Opentargets

    Query Open Targets for target-disease association evidence. Returns genetic evidence score, clinical evidence, known drugs, tractability, and safety liabilities for a gene-disease pair.

  • query_package_registryQuery Package Registry

    Look up package metadata from npm or PyPI before recommending code, analysis packages, API clients, or dataset tooling.

Show 9 more tools
  • rank_documents_by_embeddingRank Documents By Embedding

    Embed a query and candidate documents, then rank documents by cosine similarity. Use for semantic matching, retrieval checks, clustering triage, and lightweight RAG over user-provided passages.

  • rerank_documentsRerank Documents

    Rerank candidate documents/passages against a query using a dedicated reranking model. Use after retrieval/search when exact relevance ordering matters.

  • run_computationRun Computation

    Evaluate deterministic mathematical expressions with optional variables. Use for algebra, matrices, vectors, transformations, descriptive numerical checks, and reproducible calculations. Does not execute arbitrary JavaScript or install packages.

  • run_statistical_analysisRun Statistical Analysis

    Run a statistical analysis computation. Supports: Wilson confidence intervals, binomial proportions, phase transition success rates, power calculations, Bayesian posterior estimates, descriptive statistics, and two-proportion comparisons. Returns computed values, interpretation, and LaTeX formula.

  • searchSearch Claidex

    Search Claidex failure claims and preprint flags. This compatibility tool returns citation-ready results for OpenAI and ChatGPT remote MCP flows.

  • search_claimsSearch Claims

    Search the Claidex failure database for post-mortems matching a drug name, gene target, disease, failure archetype, or sponsor. Returns matching claims with title, slug, drug, target, disease, phase, failure archetype, Open Targets score, and MRS score.

  • search_preprint_flagsSearch Preprint Flags

    Search the Claidex Preprint Watch database for bioRxiv preprints flagged as contradicting the clinical failure record. Search by target gene, disease, or preprint title.

  • search_pubmedSearch Pubmed

    Search PubMed for biomedical literature. Returns title, authors, journal, year, DOI, abstract, and PMID for each result.

  • web_searchWeb Search

    Search the web for recent news, investor commentary, analyst notes, press releases, and conference coverage about drugs, clinical trials, or biomedical mechanisms.

Signals

Weekly downloads
10
Last release
May 24, 2026 (5 months ago)
Last package publish
May 24, 2026 (5 months ago)
Repository
Not found on GitHub (deleted or private)

From the package registry.

Details

Registry name
com.claidex/failure-intelligence
Version
1.0.0
Auth
Bearer token, API key
License
License unknown
First seen
Oct 24, 2026
Last checked
Oct 25, 2026
Cite this page

Claidex MCP. Agent Mart. https://agentmart.dev/connectors/claidex-com-failure-intelligence (last updated 2026-10-25)