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Enzyme

Semantic search and pattern discovery for Obsidian and markdown vaults.

Connector by byenzyme · GitHub account verified by the MCP Registry

IndexedLicense unknownLocal (stdio)★ 89
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Works with Claude Desktop. Read the repository before you give any tool access to your data.

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MCP bundle (.mcpb): open it with Claude Desktop.

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About

Semantic search and pattern discovery for Obsidian and markdown vaults.

No reviews yet. Installed it? Reviews come from verified installers only. How reviews work

Permissions

What this server can do and what it asks for, from its tool list, install config and code. Checked Oct 25, 2026.

Tools
2 read · 0 write · 0 delete · 1 not yet classified
Secrets
None asked for
Install scripts
None found
Runs as
Downloaded binary

Tools by what they do 3

Read from the source code; the running server may list different tools.

Read 2 · Look things up without changing anything.

  • enzyme_catalyze
  • enzyme_status

Not yet classified 1 · We could not tell from the name and description.

  • enzyme_petri

Network hosts it talks to 23

  • api.anthropic.com · found in code
  • api.are.na · found in code
  • api.enzyme.garden · found in code
  • api.github.com · found in code
  • api.openai.com · found in code
  • are.na · found in code
  • byenzyme.com · found in code
  • dump-prompts.invalid · found in code
  • evilare.na · found in code
  • example.test · found in code
  • generativelanguage.googleapis.com · found in code
  • github.com · found in install command, code
  • hosted.invalid · found in code
  • huggingface.co · found in code
  • llm.invalid · found in code
  • memo-isolated.test · found in code
  • memory.enzyme.garden · found in code
  • new-router.invalid · found in code
  • openrouter.ai · found in code
  • plan.invalid · found in code
  • raw.githubusercontent.com · found in code
  • readwise.io · found in code
  • status.invalid · found in code

Files it touches

  • /home/user/.ssh/authorized_keys
  • /tmp/.claude/plugins/cache/enzyme
  • /home/bob/obsidian
  • /home/linuxbrew
  • /home/test
  • /mnt
  • /mnt/data
  • /opt/homebrew
  • /opt/homebrew/bin/enzyme
  • /proc/cpuinfo
  • /srv/target
  • /tmp/.codex/plugins/enzyme/bin/enzyme
  • /tmp/app/config.toml
  • /tmp/config.enzyme
  • /tmp/custom-enzyme
  • /tmp/eh
  • /tmp/eh/auth.json
  • /tmp/eh/config.toml
  • /tmp/messages.db
  • /tmp/messages.sqlite
  • /tmp/micros.db
  • /tmp/millis.db
  • /tmp/nanos.db
  • /tmp/plain
  • /tmp/recipe-vault
  • /tmp/seconds.db
  • /tmp/sources
  • /tmp/weights
  • /tmp/x.db
  • /Users/alice
  • /Users/alice/.local/bin/enzyme
  • /Users/alice/code/my-app
  • /Users/alice/Library/Messages/chat.db
  • /Users/alice/notes
  • /Users/alice/other-vault
  • /Users/alice/vault
  • /Users/alice/yet-another
  • /Users/me
  • /Users/you/obsidian
  • /usr/local/Cellar

Tools (3)

Read from the source code; the running server may differ. Descriptions are the server’s own words; hidden characters are shown as [U+…].

  • enzyme_catalyze

    Search the vault by keyword and meaning together. Names, titles, plain words, and concepts all work; start from the user's own wording and search several times with different wording for questions about their own thinking.

  • enzyme_petri

    Vault working memory. Returns top entities and their catalysts (generated questions about what the user decided, changed, or left open), ranked by relevance to the query, or by recency if no query is given. Use it to see what matters and what the user calls it; when you can only search once or twice, carry a relevant catalyst phrase into enzyme_catalyze.

  • enzyme_status

    Report vault index stats: doc count, entity count, catalyst coverage.

Signals

Stars
89
Forks
3
Open issues
0
Last commit
Oct 24, 2026 (10 days ago)
Last release
Oct 26, 2026 (8 days ago)

From GitHub (fetched Oct 24, 2026).

Details

Registry name
io.github.byenzyme/enzyme
Version
0.13.2
Auth
No auth
License
License unknown
First seen
Oct 24, 2026
Last checked
Nov 1, 2026

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Cite this page

Enzyme MCP server. Agent Mart. https://agentmart.dev/connectors/byenzyme-enzyme (last updated 2026-11-01)